This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by ropp_1dvar configure 10.0, which was generated by GNU Autoconf 2.69. Invocation command line was $ ./configure --prefix=/data/ychen131/ROPP_ROOT/gfortran ## --------- ## ## Platform. ## ## --------- ## hostname = starro.umd.edu uname -m = x86_64 uname -r = 4.18.0-80.el8.x86_64 uname -s = Linux uname -v = #1 SMP Wed Mar 13 12:02:46 UTC 2019 /usr/bin/uname -p = x86_64 /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: ./ PATH: /home/ychen131/bin PATH: /home/ychen131/.local/bin PATH: /home/ychen131/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /data/ychen131/ROPP_ROOT/gfortran/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:1936: checking for a BSD-compatible install configure:2004: result: /usr/bin/install -c configure:2015: checking whether build environment is sane configure:2065: result: yes configure:2206: checking for a thread-safe mkdir -p configure:2245: result: /usr/bin/mkdir -p configure:2258: checking for gawk configure:2274: found /usr/bin/gawk configure:2285: result: gawk configure:2296: checking whether make sets $(MAKE) configure:2318: result: yes configure:2403: checking build system type configure:2417: result: x86_64-unknown-linux-gnu configure:2437: checking host system type configure:2450: result: x86_64-unknown-linux-gnu configure:2580: checking for Fortran compiler version configure:2589: gfortran --version >&5 GNU Fortran (GCC) 8.5.0 20210514 (Red Hat 8.5.0-15) Copyright (C) 2018 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:2600: $? = 0 configure:2589: gfortran -v >&5 Using built-in specs. COLLECT_GCC=gfortran COLLECT_LTO_WRAPPER=/usr/libexec/gcc/x86_64-redhat-linux/8/lto-wrapper OFFLOAD_TARGET_NAMES=nvptx-none OFFLOAD_TARGET_DEFAULT=1 Target: x86_64-redhat-linux Configured with: ../configure --enable-bootstrap --enable-languages=c,c++,fortran,lto --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-shared --enable-threads=posix --enable-checking=release --enable-multilib --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-linker-build-id --with-gcc-major-version-only --with-linker-hash-style=gnu --enable-plugin --enable-initfini-array --with-isl --disable-libmpx --enable-offload-targets=nvptx-none --without-cuda-driver --enable-gnu-indirect-function --enable-cet --with-tune=generic --with-arch_32=x86-64 --build=x86_64-redhat-linux Thread model: posix gcc version 8.5.0 20210514 (Red Hat 8.5.0-15) (GCC) configure:2600: $? = 0 configure:2589: gfortran -V >&5 gfortran: error: unrecognized command line option '-V' gfortran: fatal error: no input files compilation terminated. configure:2600: $? = 1 configure:2589: gfortran -qversion >&5 gfortran: error: unrecognized command line option '-qversion'; did you mean '--version'? gfortran: fatal error: no input files compilation terminated. configure:2600: $? = 1 configure:2615: checking whether the Fortran compiler works configure:2637: gfortran -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f >&5 configure:2641: $? = 0 configure:2689: result: yes configure:2692: checking for Fortran compiler default output file name configure:2694: result: a.out configure:2700: checking for suffix of executables configure:2707: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f >&5 configure:2711: $? = 0 configure:2733: result: configure:2749: checking whether we are cross compiling configure:2757: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f >&5 configure:2761: $? = 0 configure:2768: ./conftest configure:2772: $? = 0 configure:2787: result: no configure:2792: checking for suffix of object files configure:2808: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f >&5 configure:2812: $? = 0 configure:2833: result: o configure:2841: checking whether we are using the GNU Fortran compiler configure:2854: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.F >&5 conftest.F:4:0: #endif Error: #endif without #if conftest.F:2:7: #ifndef __GNUC__ 1 Error: Invalid character in name at (1) conftest.F:3:7: choke me 1 Error: Unclassifiable statement at (1) configure:2854: $? = 1 configure: failed program was: | program main | #ifndef __GNUC__ | choke me | #endif | | end program main configure:2863: result: no configure:2869: checking whether gfortran accepts -g configure:2880: gfortran -c -g conftest.f >&5 configure:2880: $? = 0 configure:2888: result: yes configure:2917: checking for Fortran compiler vendor configure:2953: result: GCC configure:3000: checking for ranlib configure:3016: found /usr/bin/ranlib configure:3027: result: ranlib configure:3051: checking for robodoc configure:3084: result: no configure:3091: checking for svn2cl configure:3124: result: no configure:3143: checking for Fortran flag to compile .f90 files configure:3163: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 configure:3163: $? = 0 configure:3172: result: none configure:3197: checking for Fortran flag needed to accept free-form source configure:3216: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 configure:3216: $? = 0 configure:3225: result: none configure:3403: checking whether compiler uses upper case module names configure:3410: result: no configure:3454: checking for Fortran whether backslash escapes configure:3467: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 conftest.f90:4:6: string='\' ' 1 Error: Unclassifiable statement at (1) configure:3467: $? = 1 configure: failed program was: | program backslash | character string*3 | | string='\' ' | end | configure:3474: result: no configure:3536: checking for Fortran module ropp_utils configure:3546: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 configure:3546: $? = 0 configure:3553: result: yes configure:3591: checking for Fortran module typesizes configure:3601: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 configure:3601: $? = 0 configure:3608: result: yes configure:3642: checking for Fortran module ropp_fm configure:3652: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 configure:3652: $? = 0 configure:3659: result: yes configure:3701: checking for Fortran module ropp_io configure:3711: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 configure:3711: $? = 0 configure:3718: result: yes configure:3753: checking for Fortran module matrix_types configure:3763: gfortran -c -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include conftest.f90 >&5 configure:3763: $? = 0 configure:3770: result: yes configure:3807: checking for iau_zp of the sofa library configure:3817: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f90 -lsofa >&5 configure:3817: $? = 0 configure:3826: result: yes configure:3877: checking for message of the ropp_utils library configure:3887: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f90 -lropp_utils -lsofa >&5 configure:3887: $? = 0 configure:3896: result: yes configure:3915: checking for nf_inq_ncid of the hdf5 library configure:3925: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f90 -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lropp_utils -lsofa >&5 configure:3925: $? = 0 configure:3934: result: yes configure:3962: checking for nf_open of the netcdf library configure:3972: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f90 -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lropp_utils -lsofa >&5 configure:3972: $? = 0 configure:3981: result: yes configure:4042: checking for is_netcdf of the ncdf library configure:4052: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f90 -lncdf -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lropp_utils -lsofa >&5 /usr/bin/ld: cannot find -lncdf collect2: error: ld returned 1 exit status configure:4052: $? = 1 configure: failed program was: | program main | call is_netcdf | end program main configure:4061: result: no configure:4089: checking for is_netcdf of the ropp_io library configure:4099: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f90 -lropp_io -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lropp_utils -lsofa >&5 configure:4099: $? = 0 configure:4108: result: yes configure:4127: checking for ropp_io_init_l1atype of the ropp_io library configure:4146: result: yes configure:4214: checking for ropp_fm_bangle_1d of the ropp_fm library configure:4224: gfortran -o conftest -O2 -I/data/ychen131/ROPP_ROOT/gfortran/include -L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64 conftest.f90 -lropp_fm -lropp_io -lropp_io -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lropp_utils -lsofa >&5 configure:4224: $? = 0 configure:4233: result: yes configure:4250: checking for nf_open of the netcdf library configure:4269: result: yes configure:4315: checking for is_netcdf of the ropp_io library configure:4334: result: yes configure:4614: creating ./config.status ## ---------------------- ## ## Running config.status. ## ## ---------------------- ## This file was extended by ropp_1dvar config.status 10.0, which was generated by GNU Autoconf 2.69. Invocation command line was CONFIG_FILES = CONFIG_HEADERS = CONFIG_LINKS = CONFIG_COMMANDS = $ ./config.status on starro.umd.edu config.status:810: creating Makefile config.status:810: creating common/Makefile config.status:810: creating errors/Makefile config.status:810: creating math/Makefile config.status:810: creating math/matrix/Makefile config.status:810: creating math/precon/Makefile config.status:810: creating qc/Makefile config.status:810: creating iono/Makefile config.status:810: creating build/Makefile config.status:810: creating data/Makefile config.status:810: creating config/Makefile config.status:810: creating doc/Makefile config.status:810: creating tools/Makefile config.status:810: creating tests/Makefile ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_env_FCFLAGS_set=set ac_cv_env_FCFLAGS_value='-O2 -I/data/ychen131/ROPP_ROOT/gfortran/include' ac_cv_env_FC_set=set ac_cv_env_FC_value=gfortran ac_cv_env_LDFLAGS_set=set ac_cv_env_LDFLAGS_value='-L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64' ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_backslash_escape=no ac_cv_fc_compiler_gnu=no ac_cv_fc_freeform=none ac_cv_fc_srcext_f90=none ac_cv_host=x86_64-unknown-linux-gnu ac_cv_lib_ropp_fm_ropp_fm_bangle_1d=yes ac_cv_lib_ropp_utils_message=yes ac_cv_objext=o ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/usr/bin/mkdir ac_cv_prog_AWK=gawk ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_fc_g=yes ac_cv_prog_make_make_set=yes ac_cv_uc_modnames=no ## ----------------- ## ## Output variables. ## ## ----------------- ## ACLOCAL='${SHELL} /data/ychen131/ROPP_FSI_Release/ropp_1dvar/missing --run aclocal-1.11' AMTAR='${SHELL} /data/ychen131/ROPP_FSI_Release/ropp_1dvar/missing --run tar' AM_CCFLAGS='' AM_CPPFLAGS='-DpgiFortran' AM_FCFLAGS=' -I../build' AM_FFLAGS='' AM_LDFLAGS='' AUTOCONF='${SHELL} /data/ychen131/ROPP_FSI_Release/ropp_1dvar/missing --run autoconf' AUTOHEADER='${SHELL} /data/ychen131/ROPP_FSI_Release/ropp_1dvar/missing --run autoheader' AUTOMAKE='${SHELL} /data/ychen131/ROPP_FSI_Release/ropp_1dvar/missing --run automake-1.11' AWK='gawk' CM_FC_UC_MODNAMES_FALSE='' CM_FC_UC_MODNAMES_TRUE='#' CM_NATIVE_AIX_FALSE='' CM_NATIVE_AIX_TRUE='#' CM_NATIVE_HPUX_FALSE='' CM_NATIVE_HPUX_TRUE='#' CYGPATH_W='echo' DEFS='-DPACKAGE_NAME=\"ropp_1dvar\" -DPACKAGE_TARNAME=\"ropp_1dvar\" -DPACKAGE_VERSION=\"10.0\" -DPACKAGE_STRING=\"ropp_1dvar\ 10.0\" -DPACKAGE_BUGREPORT=\"romsaf@metoffice.gov.uk\" -DPACKAGE_URL=\"\" -DPACKAGE=\"ropp_1dvar\" -DVERSION=\"10.0\" -DHAVE_MODULE_ROPP_UTILS=1 -DHAVE_MODULE_TYPESIZES=1 -DHAVE_MODULE_ROPP_FM=1 -DHAVE_MODULE_ROPP_IO=1 -DHAVE_MODULE_MATRIX_TYPES=1 -DHAVE_LIBRARY_SOFA=1 -DHAVE_LIBRARY_HDF5=1 -DHAVE_LIBRARY_NETCDF=1 -DHAVE_LIBRARY_ROPP_IO=1 -DHAVE_LIBRARY_ROPP_IO=1 -DHAVE_LIBRARY_NETCDF=1 -DHAVE_LIBRARY_ROPP_IO=1' ECHO_C='' ECHO_N='-n' ECHO_T='' EXEEXT='' FC='gfortran' FCFLAGS='-O2 -I/data/ychen131/ROPP_ROOT/gfortran/include' FCFLAGS_f90='' FC_BACKSLASH_ESCAPE_FALSE='' FC_BACKSLASH_ESCAPE_TRUE='#' FC_IS_NAG_FALSE='' FC_IS_NAG_TRUE='#' HAVE_HDF5_FALSE='#' HAVE_HDF5_TRUE='' HAVE_MATRIX_TYPES_FALSE='#' HAVE_MATRIX_TYPES_TRUE='' HAVE_NCDF_FALSE='' HAVE_NCDF_IO_FALSE='' HAVE_NCDF_IO_TRUE='#' HAVE_NCDF_TRUE='#' HAVE_NETCDF_FALSE='#' HAVE_NETCDF_TRUE='' HAVE_ROPP_FM_FALSE='#' HAVE_ROPP_FM_TRUE='' HAVE_ROPP_IO_FALSE='#' HAVE_ROPP_IO_TRUE='' HAVE_ROPP_UTILS_FALSE='#' HAVE_ROPP_UTILS_TRUE='' HAVE_SOFA_FALSE='#' HAVE_SOFA_TRUE='' INSTALL_DATA='${INSTALL} -m 644' INSTALL_PROGRAM='${INSTALL}' INSTALL_SCRIPT='${INSTALL}' INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' LDFLAGS='-L/data/ychen131/ROPP_ROOT/gfortran/lib -L/data/ychen131/ROPP_ROOT/gfortran/lib64' LIBOBJS='' LIBS='-lropp_io -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lropp_fm -lropp_io -lropp_io -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lnetcdff -lnetcdf -lhdf5_hl -lhdf5 -lz -ldl -lropp_utils -lsofa ' LTLIBOBJS='' M4_OPTS='' MAKEINFO='${SHELL} /data/ychen131/ROPP_FSI_Release/ropp_1dvar/missing --run makeinfo' MKDIR_P='/usr/bin/mkdir -p' NO_TYPESIZES_FALSE='' NO_TYPESIZES_TRUE='#' OBJEXT='o' PACKAGE='ropp_1dvar' PACKAGE_BUGREPORT='romsaf@metoffice.gov.uk' PACKAGE_NAME='ropp_1dvar' PACKAGE_STRING='ropp_1dvar 10.0' PACKAGE_TARNAME='ropp_1dvar' PACKAGE_URL='' PACKAGE_VERSION='10.0' PATH_SEPARATOR=':' RANLIB='ranlib' ROBODOC='' SET_MAKE='' SHELL='/bin/sh' STRIP='' SVN2CL='' VERSION='10.0' ac_ct_FC='' am__EXEEXT_FALSE='' am__EXEEXT_TRUE='#' am__isrc='' am__leading_dot='.' am__tar='${AMTAR} chof - "$$tardir"' am__untar='${AMTAR} xf -' bindir='${exec_prefix}/bin' build='x86_64-unknown-linux-gnu' build_alias='' build_cpu='x86_64' build_os='linux-gnu' build_vendor='unknown' datadir='${datarootdir}' datarootdir='${prefix}/share' docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' dvidir='${docdir}' exec_prefix='${prefix}' host='x86_64-unknown-linux-gnu' host_alias='' host_cpu='x86_64' host_os='linux-gnu' host_vendor='unknown' htmldir='${docdir}' includedir='${prefix}/include' infodir='${datarootdir}/info' install_sh='${SHELL} /data/ychen131/ROPP_FSI_Release/ropp_1dvar/install-sh' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/libexec' localedir='${datarootdir}/locale' localstatedir='${prefix}/var' mandir='${datarootdir}/man' mkdir_p='/usr/bin/mkdir -p' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='/data/ychen131/ROPP_ROOT/gfortran' program_transform_name='s,x,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## /* confdefs.h */ #define PACKAGE_NAME "ropp_1dvar" #define PACKAGE_TARNAME "ropp_1dvar" #define PACKAGE_VERSION "10.0" #define PACKAGE_STRING "ropp_1dvar 10.0" #define PACKAGE_BUGREPORT "romsaf@metoffice.gov.uk" #define PACKAGE_URL "" #define PACKAGE "ropp_1dvar" #define VERSION "10.0" #define HAVE_MODULE_ROPP_UTILS 1 #define HAVE_MODULE_TYPESIZES 1 #define HAVE_MODULE_ROPP_FM 1 #define HAVE_MODULE_ROPP_IO 1 #define HAVE_MODULE_MATRIX_TYPES 1 #define HAVE_LIBRARY_SOFA 1 #define HAVE_LIBRARY_HDF5 1 #define HAVE_LIBRARY_NETCDF 1 #define HAVE_LIBRARY_ROPP_IO 1 #define HAVE_LIBRARY_ROPP_IO 1 #define HAVE_LIBRARY_NETCDF 1 #define HAVE_LIBRARY_ROPP_IO 1 configure: exit 0